Indian Scientists Uncover Genetic Secrets of New Mpox Variant in Kerala Cases
India's First Genetic Study of New Mpox Variant Links Cases to Travel

Groundbreaking Genetic Analysis of Mpox Clade Ib Variant Conducted by Indian Scientists

In a significant scientific breakthrough, researchers from India have completed the country's first comprehensive genetic investigation of the newer Mpox variant that has been detected within its borders. This pioneering study establishes clear connections between recent cases in Kerala and international travel patterns while revealing compelling evidence of ongoing human-to-human transmission.

Focus on the Emerging Clade Ib Variant

The research concentrated specifically on Mpox Clade Ib, a recently emerged viral variant that has been responsible for driving outbreaks across various regions of Africa. This particular strain has now been identified in multiple countries beyond the African continent, raising global health concerns about its potential spread and impact.

Unlike earlier forms of Mpox that were primarily associated with animal-to-human transmission, the Clade Ib variant demonstrates much clearer indications of sustained spread between people. This distinction has prompted heightened surveillance efforts and increased attention from public health authorities worldwide.

Comprehensive Study Methodology and Findings

The landmark study was spearheaded by scientists from the Indian Council of Medical Research-National Institute of Virology (ICMR-NIV) in Pune, collaborating with several other Indian institutions including various Viral Research and Diagnostic Laboratories (VRDL). The research team examined ten laboratory-confirmed cases of Mpox Clade Ib that were identified in Kerala between September 2024 and March 2025.

Published in the prestigious Journal Virology, the findings reveal active viral evolution with significant implications for disease surveillance systems and public health preparedness measures. "The study confirmed that the Mpox virus is indeed mutating, as we found a distinctive mutational pattern that signals sustained human-to-human transmission," explained one researcher involved in the investigation.

Key Genetic Discoveries and Transmission Patterns

Scientists discovered that this mutation pattern appeared stronger in Clade Ib than in older forms of the virus, suggesting continuous adaptation as the variant circulates among human populations. "The sequences also carried mutations in several genes that had earlier been identified as hotspots in Clade Ib strains from the Democratic Republic of Congo, pointing to evolutionary convergence across different geographical regions," noted another scientist participating in the study.

Notably, researchers identified a new mutation in six of the ten examined cases, which is currently undergoing further investigation to understand its potential implications for viral behavior and transmission dynamics.

The comprehensive analysis included multiple dimensions:

  • Detailed examination of patient symptoms and clinical presentations
  • Measurement of viral load in infected individuals
  • Assessment of immune responses to the infection
  • Complete genetic sequencing of the viral strains

Travel Connections and Transmission Pathways

The research findings suggest that the virus did not enter India through a single isolated case but rather arrived as part of a broader regional spread connected to international travel networks. Epidemiological analysis revealed that nine of the ten patients had recently traveled abroad prior to their diagnosis.

Local transmission was documented in one instance where an individual became infected through close contact with a family member who had a history of international travel. This finding underscores the potential for secondary spread even when initial cases are travel-related.

Timeline Implications and Surveillance Concerns

The study indicates that Clade Ib cases linked to travel were detected in India as early as 2024, preceding the World Health Organization's formal reporting of the first global Clade Ib case in February 2025. This temporal discrepancy raises important questions about potential undetected or underreported transmission occurring within international travel hubs.

The authors emphasize that this timeline suggests possible gaps in global surveillance systems that might allow emerging pathogens to circulate undetected for periods before formal recognition and reporting.

Research Team and Collaborative Effort

The investigation involved a distinguished team of scientists including Dr. Pragya Yadav, Dr. Rima R. Sahay, Dr. Anita M. Shete, along with numerous researchers from Viral Research and Diagnostic Laboratories across India. This collaborative approach brought together expertise from multiple institutions to address this significant public health challenge.

This groundbreaking research represents a crucial step forward in understanding the evolving nature of Mpox transmission and provides valuable insights that will inform both national and international public health strategies moving forward.